Skatebase

Data Downloads

Little Skate Mitochondrion

Mitochondrial Genome (FASTA) – 16,570 bp (17 KB) [GenBank JQ034406]
Mitochondrial Genome Annotations (GFF3) – 39 Features (21 KB)
Mitochondrial Gene Features (FASTA) – 39 Features (22 KB)
Mitochondrial Proteins (FASTA) – 13 Proteins (5.5 KB)

Little Skate Genome

Little Skate Genomic Contigs Build 2 (FASTA zip) – 2,962,365 contigs; 1,555,444,314 bp (521 MB) [GenBank AESE010000000]
– component raw sequence data has been submitted to the NCBI Sequence Read Archive [SRA026856]

Little Skate Transcriptome

Little Skate Transcriptomic Contigs Build 2 (FASTA zip) – 103,996 contigs; 57,210,566 bp (18.7 MB) [GEO:GSM643957]

Other Chondrichthyan Transcriptomes

Small-Spotted Catshark Transcriptomic Contigs (FASTA zip) – 107,231 contigs; 56,908,067 bp (18.7 MB) [GEO:GSM643958]
Elephant Shark Transcriptomic Contigs (FASTA zip) – 92,334 contigs; 44,602,679 bp (14.7 MB) [GEO:GSM643959]

NCBI Data Links

Partner Links

Elephant Shark Genome Project

American Elasmobranch Society

Vertebrate TimeCapsule

Funding provided by:
NIH National Institute of General Medical Sciences INBRE Program
National Science Foundation EPSCoR Program

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Center for Bioinformatics and Computational Biology
contact: info@skatebase.org