show_annotations

Gene table
Gene
Gene SymbolND4
Reccommended Protein NameNADH-ubiquinone oxidoreductase chain 4
SkateBase IDLEUER_000009
Gene typemitochondrial : protein coding
Length (AA)460
UniProtKBG9L9I8
PIRiProClass G9L9I8
Chondrichthyan Distribution
SpeciesLeucoraja erinaceaLeucoraja erinaceaScyliorhinus caniculaCalllorhincus milii
evidencegenometranscriptometranscriptometranscriptome
Contig ID32735 ---
FastaFasta---
Coverage----
Annotation Features Error: Embedded data could not be displayed.
Family and Domains

Interpro

Summary
IPR010227. NADH_Q_OxRdtase_chainM/4
IPR001750. NADH_UbQ/plastoQ_OxRdtase
IPR003918. NADH_UbQ_OxRdtase
IPR000260. NADH_UbQ_OxRdtase_chain4_N

Pfam


Summary
PF00361 Oxidored_q1. 1 hit
PF01059 Oxidored_q5_N. 1 hit
Gene Ontology

Biological Process

GO IDGO TermEvidenceSource
GO:0006120 mitochondrial electron transport, NADH to ubiquinone IEA UniProtKB
GO:0022900 electron transport chain IEA UniProtKB
GO:0042773 ATP synthesis coupled electron transport IEA UniProtKB
GO:0055114 oxidation-reduction process IEA UniProtKB

Molecular Function

GO IDGO TermEvidenceSource
GO:0008137 NADH dehydrogenase (ubiquinone) activity IEA UniProtKB
GO:0016491 oxidoreductase activity IEA UniProtKB

Cellular Component

GO IDGO TermEvidenceSource
GO:0005739 mitochondrion IEA UniProtKB
GO:0016020 membrane IEA UniProtKB
GO:0016021 integral to membrane IEA UniProtKB
GO:0031966 mitochondrial membrane IEA UniProtKB
GO:0070469 respiratory chain IEA UniProtKB
Homology
EnsemblENSGT00530000063968
OrthoDBEOG6TMS8P.NADH-ubiquinone oxidoreductase chain
Gene3D-
TreeFamTF343520.
Literature

Fishes
All taxa

All taxa

Complete mitochondrial genome of the Yellownose skate: Zearaja chilensis (Rajiformes, Rajidae).
Jeong D, Lee YH.Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):293-4. doi: 10.3109/19401736.2014.892083. Epub 2014 Mar 11.

Complete mitochondrial genome of the Kwangtung skate: Dipturus kwangtungensis (Rajiformes, Rajidae).
Jeong D, Kim S, Kim CG, Lee YH.Mitochondrial DNA. 2015;26(6):873-4. doi: 10.3109/19401736.2013.861437. Epub 2014 Jan 10.

The complete mitochondrial genome of the Longnose skate: Raja rhina (Rajiformes, Rajidae).
Jeong D, Lee YH.Mitochondrial DNA. 2015 Feb;26(1):123-4. doi: 10.3109/19401736.2013.814113. Epub 2013 Jul 24.

The complete mitochondrial genome of the Korean skate: Hongeo koreana (Rajiformes, Rajidae).
Jeong D, Kim S, Kim CG, Lee YH.Mitochondrial DNA. 2014 Dec;25(6):437-8. doi: 10.3109/19401736.2013.809448. Epub 2013 Jul 8.

A mitochondrial species identification assay for Australian blacktip sharks (Carcharhinus tilstoni, C. limbatus and C. amblyrhynchoides) using real-time PCR and high-resolution melt analysis.
Morgan JA, Welch DJ, Harry AV, Street R, Broderick D, Ovenden JR.Mol Ecol Resour. 2011 Sep;11(5):813-9. doi: 10.1111/j.1755-0998.2011.03023.x. Epub 2011 May 12.

IUCN classification zones concord with, but underestimate, the population genetic structure of the zebra shark Stegostoma fasciatum in the Indo-West Pacific.
Dudgeon CL, Broderick D, Ovenden JR.Mol Ecol. 2009 Jan;18(2):248-61. doi: 10.1111/j.1365-294X.2008.04025.x.

Comparative phylogeography reveals host generalists, specialists and cryptic diversity: Hexabothriid, microbothriid and monocotylid monogeneans from rhinobatid rays in southern Australia.
Glennon V, Perkins EM, Chisholm LA, Whittington ID.Int J Parasitol. 2008 Nov;38(13):1599-612. doi: 10.1016/j.ijpara.2008.05.017. Epub 2008 Jun 25.


Gene Table