show_annotations

Gene table
Gene
Gene SymbolCOX1
Reccommended Protein NameCytochrome c oxidase subunit 1
SkateBase IDLEUER_000003
Gene typemitochondrial : protein coding
Length (AA)518
UniProtKBG9L9I1
PIRiProClass G9L9I1
Chondrichthyan Distribution
SpeciesLeucoraja erinaceaLeucoraja erinaceaScyliorhinus caniculaCalllorhincus milii
evidencegenometranscriptometranscriptometranscriptome
Contig ID32735 ---
FastaFasta---
Coverage----
Annotation Features Error: Embedded data could not be displayed.
Family and Domains

Interpro

Summary
IPR000883. Cyt_c_Oxase_su1
IPR023615. Cyt_c_Oxase_su1_BS
IPR023616. Cyt_c_Oxase_su1_dom

Pfam


Summary
PF00115 COX1. 1 hit
Gene Ontology

Biological Process

GO IDGO TermEvidenceSource
GO:0006119 oxidative phosphorylation IEA UniProtKB
GO:0009060 aerobic respiration IEA UniProtKB
GO:0022900 electron transport chain IEA UniProtKB
GO:0055114 oxidation-reduction process IEA UniProtKB

Molecular Function

GO IDGO TermEvidenceSource
GO:0004129 cytochrome-c oxidase activity IEA UniProtKB
GO:0005506 iron ion binding IEA UniProtKB
GO:0009055 electron carrier activity IEA UniProtKB
GO:0016491 oxidoreductase activity IEA UniProtKB
GO:0020037 heme binding IEA UniProtKB
GO:0046872 metal ion binding IEA UniProtKB

Cellular Component

GO IDGO TermEvidenceSource
GO:0005739 mitochondrion IEA UniProtKB
GO:0005743 mitochondrial inner membrane IEA UniProtKB
GO:0016020 membrane IEA UniProtKB
GO:0016021 integral to membrane IEA UniProtKB
GO:0070469 respiratory chain IEA UniProtKB
Homology
EnsemblENSGT00390000001518
OrthoDBEOG6J3XQ6.Cytochrome c oxidase subunit
Gene3D

1.20.210.10   Cytochrome C Oxidase, chain A

TreeFamTF353096.
Literature

Fishes
All taxa

All taxa

Reproductive biology and feeding habits of the prickly dogfish Oxynotus bruniensis.
Finucci B, Bustamante C, Jones EG, Dunn MR.J Fish Biol. 2016 Nov;89(5):2326-2344. doi: 10.1111/jfb.13116. Epub 2016 Sep 8.

When proglottids and scoleces conflict: phylogenetic relationships and a family-level classification of the Lecanicephalidea (Platyhelminthes: Cestoda).
Jensen K, Caira JN, Cielocha JJ, Littlewood DT, Waeschenbach A.Int J Parasitol. 2016 May;46(5-6):291-310. doi: 10.1016/j.ijpara.2016.02.002. Epub 2016 Mar 17.

The Species and Origin of Shark Fins in Taiwan's Fishing Ports, Markets, and Customs Detention: A DNA Barcoding Analysis.
Chuang PS, Hung TC, Chang HA, Huang CK, Shiao JC.PLoS One. 2016 Jan 22;11(1):e0147290. doi: 10.1371/journal.pone.0147290. eCollection 2016.

Complete mitochondrial genome of the Yellownose skate: Zearaja chilensis (Rajiformes, Rajidae).
Jeong D, Lee YH.Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):293-4. doi: 10.3109/19401736.2014.892083. Epub 2014 Mar 11.

Complete mitochondrial genome of the Kwangtung skate: Dipturus kwangtungensis (Rajiformes, Rajidae).
Jeong D, Kim S, Kim CG, Lee YH.Mitochondrial DNA. 2015;26(6):873-4. doi: 10.3109/19401736.2013.861437. Epub 2014 Jan 10.

The complete mitochondrial genome of the Longnose skate: Raja rhina (Rajiformes, Rajidae).
Jeong D, Lee YH.Mitochondrial DNA. 2015 Feb;26(1):123-4. doi: 10.3109/19401736.2013.814113. Epub 2013 Jul 24.

The complete mitochondrial genome of the Korean skate: Hongeo koreana (Rajiformes, Rajidae).
Jeong D, Kim S, Kim CG, Lee YH.Mitochondrial DNA. 2014 Dec;25(6):437-8. doi: 10.3109/19401736.2013.809448. Epub 2013 Jul 8.


Gene Table